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Test Code MFBNG FBN1 Full Gene Sequencing with Deletion/Duplication, Varies


Ordering Guidance


This is a single gene test for the FBN1 gene. The FBN1 gene is also included on multi-gene panels. If testing for multiple overlapping clinical presentations is desired, see MFRGG Marfan, Loeys-Dietz, and Aortopathy Gene Panel, Varies or CAORG / Comprehensive Marfan, Loeys-Dietz, Ehlers-Danlos, and Aortopathy Gene Panel, Varies.

 

Customization of this panel and single gene analysis for any gene present on this panel are available. For more information see CGPH / Custom Gene Panel, Hereditary, Next-Generation Sequencing, Varies.

 

Targeted testing for familial variants (also called site-specific or known mutations testing) is available for the genes on this panel. See FMTT / Familial Variant, Targeted Testing, Varies. To obtain more information about this testing option, call 800-533-1710.



Shipping Instructions


Specimen preferred to arrive within 96 hours of collection.



Necessary Information


Prior Authorization is available, but not required, for this test. If proceeding with the prior authorization process, submit the required form with the specimen.



Specimen Required


Patient Preparation: A previous bone marrow transplant from an allogenic donor will interfere with testing. Call 800-533-1710 for instructions for testing patients who have received a bone marrow transplant.

 

Specimen Type: Whole blood

Container/Tube:

Preferred: Lavender top (EDTA) or yellow top (ACD)

Acceptable: Any anticoagulant

Specimen Volume: 3 mL

Collection Instructions:

1. Invert several times to mix blood.

2. Send whole blood specimen in original tube. Do not aliquot.

Specimen Stability Information: Ambient (preferred)/Refrigerated


Forms

1. New York Clients-Informed consent is required. Document on the request form or electronic order that a copy is on file. The following documents are available:

-Informed Consent for Genetic Testing (T576)

-Informed Consent for Genetic Testing (Spanish) (T826)

2. Connective Tissue/Cerebrovascular Disease Genetic Testing Patient Information

3. FBN1 Full Gene Analysis (MFBNG) Prior Authorization Ordering Instructions

4. If not ordering electronically, complete, print, and send a Cardiovascular Test Request Form (T724) with the specimen.

Secondary ID

617365

Useful For

Providing a genetic evaluation for patients with a personal or family history suggestive of Marfan syndrome and other FBN1-related conditions

 

Establishing a diagnosis for Marfan syndrome and other FBN1-related conditions

Method Name

Sequence Capture and Targeted Next-Generation Sequencing followed by Polymerase Chain Reaction (PCR) and Sanger Sequencing.

Reporting Name

FBN1 Full Gene Analysis

Specimen Type

Varies

Specimen Minimum Volume

1 mL

Specimen Stability Information

Specimen Type Temperature Time Special Container
Varies Varies

Reject Due To

All specimens will be evaluated at Mayo Clinic Laboratories for test suitability.

Clinical Information

Fibrillin-1 is a 320 kDa, cysteine-rich glycoprotein found in the extracellular matrix. Monomers of fibrillin-1 associate to form microfibrils that provide mechanical stability and elastic properties to connective tissues. Fibrillin-1 is encoded by the FBN1 gene, which contains 65 exons and is located at chromosome 15q21.

 

Disease-causing FBN1 variants are most commonly associated with Marfan syndrome (MFS), an autosomal dominant connective tissue disease involving the ocular, skeletal, and cardiovascular systems. Ocular MFS manifestations most commonly include myopia and ectopia lentis (lens displacement). Skeletal manifestations can include arachnodactyly (abnormally long and slender fingers and toes), dolichostenomelia (long limbs), pectus (chest wall) deformity, and scoliosis. Cardiovascular manifestations, which are the major cause of early morbidity and mortality in MFS, include aortic aneurysm and dissection, as well as mitral valve and tricuspid valve prolapse.(1) The clinical diagnosis of Marfan syndrome is based on the revised Ghent nosology for the Marfan syndrome.(2) There may be significant inter- and intrafamilial variability in the MFS phenotype.

 

Disease-causing FBN1 variants have also been reported in several other rare phenotypes with variable overlap with classic MFS.(3) In some cases, MFS may present in the neonatal period with severe, rapidly progressive disease (previously termed "neonatal Marfan syndrome"). Other FBN1-associated conditions include autosomal dominant ectopia lentis (displacement of the lens of the eye), isolated skeletal features of MFS, MASS phenotype (mitral valve prolapse, aortic diameter increased, stretch marks, skeletal features of MFS), autosomal dominant Weill-Marchesani syndrome (short stature, short fingers, ectopia lentis), Marfan lipodystrophy syndrome, and stiff skin syndrome.

 

Hundreds of disease-causing variants have been identified in FBN1, many of them unique to individual families. There is a wide range of variability, including intrafamilial variability, in expressivity among disease-causing FBN1 variants. Approximately two-thirds of disease-causing FBN1 variants are missense changes, with the majority of these being cysteine substitutions. Approximately 25% to 33% of disease-causing FBN1 variants are de novo, in which an individual has no family history of disease. Disease-causing FBN1 variants have been shown to occur across the gene. Some genotype-phenotype correlations have been observed, including the association with truncating and splicing variants with risk for aortic dissection, cysteine-based variants associated with ectopia lentis, and severe, early onset MFS associated with variants in exons 24 through 32.(4-6)

 

Marfan syndrome has significant clinical overlap with a condition called Loeys-Dietz syndrome (LDS); however, the vascular phenotype of LDS can be more severe, and LDS has disease-causing variants in different genes (TGFBR1, TGFBR2, SMAD2, SMAD3, TGFB2 and TGFB3). When the diagnosis of MFS, LDS, or a related disorder is suspected, the use of genetic testing is important to verify the diagnosis and provide appropriate clinical management. Single gene analysis of the FBN1 gene may be appropriate when there is a very high index of suspicion for Marfan syndrome based on clinical presentation and Ghent diagnostic criteria, while multigene panel-based testing can be more appropriate when the differential diagnosis includes Marfan syndrome and additional, overlapping phenotypes. Confirmation of the genetic diagnosis also allows for preconception, prenatal, and family counseling.

Reference Values

An interpretive report will be provided.

Interpretation

All detected variants are evaluated according to American College of Medical Genetics and Genomics recommendations.(7) Variants are classified based on known, predicted, or possible pathogenicity and reported with interpretive comments detailing their potential or known significance.

Method Description

Next-generation sequencing (NGS) and/or Sanger sequencing are performed to test for the presence of variants in coding regions and intron/exon boundaries of FBN1, as well as some other regions that have known disease-causing variants. The human genome reference GRCh37/hg19 build was used for sequence read alignment. At least 99% of the bases are covered at a read depth over 30X. Sensitivity is estimated at above 99% for single nucleotide variants, above 94% for deletion-insertions (delins) less than 40 base pairs (bp), above 95% for deletions up to 75 bp and insertions up to 47 bp. NGS and/or a polymerase chain reaction-based quantitative method is performed to test for the presence of deletions and duplications in FBN1.

 

There may be regions of genes that cannot be effectively evaluated by sequencing or deletion and duplication analysis as a result of technical limitations of the assay, including regions of homology, high guanine-cytosine content, and repetitive sequences.(Unpublished Mayo method)

 

The reference transcript for FBN1 gene is NM_000138.4. Reference transcript numbers may be updated due to transcript re-versioning. Always refer to the final patient report for gene transcript information referenced at the time of testing. Confirmation of select reportable variants may be performed by alternate methodologies based on internal laboratory criteria.

Day(s) Performed

Varies

Performing Laboratory

Mayo Clinic Laboratories in Rochester

Test Classification

This test was developed and its performance characteristics determined by Mayo Clinic in a manner consistent with CLIA requirements. It has not been cleared or approved by the US Food and Drug Administration.

CPT Code Information

81408

LOINC Code Information

Test ID Test Order Name Order LOINC Value
MFBNG FBN1 Full Gene Analysis 77114-7

 

Result ID Test Result Name Result LOINC Value
617366 Test Description 62364-5
617367 Specimen 31208-2
617368 Source 31208-2
617369 Result Summary 50397-9
617370 Result 82939-0
617371 Interpretation 69047-9
617372 Additional Results 82939-0
617373 Resources 99622-3
617374 Additional Information 48767-8
617375 Method 85069-3
617376 Genes Analyzed 48018-6
617377 Disclaimer 62364-5
617378 Released By 18771-6

Prior Authorization

Insurance preauthorization is available for this testing; forms are available.

 

Patient financial assistance may be available to those who qualify. Patients who receive a bill from Mayo Clinic Laboratories will receive information on eligibility and how to apply.